Currently Available Modules
If you require a software package that is not currently available on the Oscar cluster, please contact ICERM's IT staff and we will work with CCV to get the software installed.
This list is current as of January 7, 2025. To see the most up to date list of software modules, log into your Oscar account and run the command module avail.
---- /oscar/runtime/software/spack/0.20.1/share/spack/lmod/linux-rhel9-x86_64/Core ----
abaqus-container/2021-akaeexs
abaqus/2017-q4ghhm5
abaqus/2021.1-i675dvw
abaqus/2024-h5273a3 (D)
abaqus/2024-ir-a4m5ld5
abaqus/2024-mbessa-ceayfuo
abaqus/2024.1-7pcdqhp
admixture/1.3.0-onwaqrp
afni/23.3.07s-zm43m3u
afni/24.2.01s-kstpoqt (D)
anaconda/2023.09-0-7nso27y
angsd/0.935-cbhuwc7
ant/1.10.13-alpqj4j
ants/2.4.3-75npyop
aria2/1.36.0-lsb7zcs
arm-forge/22.1.3-zq7lvdq
armadillo/12.2.0-4clpczv
atom/1.19.3-ty5sdsn
autoconf/2.69-p4rpdx2
avogadro2/1.99.0-5zl5qaw
awscli/1.27.84-v22kngs
bamtools/2.5.2-ki3mdef
basilisk/2023.11.11s-x4isdvp
bazel/6.1.1-vvtxktr
bbmap/39.01-jnnkpwk
bcftools/1.13-76jesdj
bcftools/1.16-ewu6fpe (D)
bcl2fastq2/2.20.0.422-z3wh636
beagle/5.4-e43mqsa
bedops/2.4.40-bjb2v2n
bedtools2/2.31.0-lsohc7s
bismark/0.23.0-eoksupu
blast-legacy/2.2.26-tcdku3a
blast-plus/2.2.30-cyxldrt
blat/37-ebfj5e6
blender/4.0.0s-v667vhv
boost/1.80.0-harukoy
bowtie/1.3.1-2kd7din
bowtie2/2.4.2-xdquyzq
bowtie2/2.5.3-qgscc2u (D)
brotli/1.0.9-h22dril
bwa/0.7.17-lu4b4dj
bxh-xcede-tools-container/1.11.14-4sphv7n
cadence/IC06.18-calibre2022.2-ascb7dw
cadence/IC06.18.090-6famfci
cadence/IC23.10.000-ppqll2n (D)
casa/6.6.0-20-py3.8.el7-dqvn5lw
cdhit/4.8.1-bqmf4jf
cellranger/arc-2.0.1-uamrhhu
cellranger/atac-2.0.0-m2tfcpk
cellranger/6.0.0-dbztt7r (D)
cfitsio/4.2.0-5grfqtu
cgal/5.4.1-64mikhl
chrome/119.0.6045.159s-avadhvk
cli11/2.3.2-pcucv7l
clustal-omega/1.2.4-mbj3dq5
cmake/3.6.1-il7bkvj
cmake/3.26.3-xi6h36u (D)
cnvnator/0.4.1-w3bkqjf
code-server/4.20.0-tcrmrcm
colordiff/1.0.21-ifskyqr
comsol/5.2-ufifhtv
comsol/5.6_yqi27-jnspqto
comsol/6.3_yqi27-7yf67lt (D)
conn/22a-nztrdv3
connectome-workbench/1.5.0-t66riqu
cppunit/1.14.0-h3hsjgu
crossrate-container/2016-27ofi4r
cuda/10.1.243-bxisbai
cuda/10.2.89-xnfjmrt
cuda/11.8.0-lpttyok
cuda/12.1.1-ebglvvq
cuda/12.2.0-4lgnkrh
cuda/12.3.0-r72aozf (D)
cudnn/7.5.1.10-10.1-hv4e2lt
cudnn/8.7.0.84-11.8-lg2dpd5
cudnn/8.9.6.50-12-56zgdoa (D)
cufflinks/2.2.1-ogzw3z5
cutensor/1.5.0.3-gqkzath
datamash/1.8-ib4aakp
dcm2niix/1.0.20220720-nwsidfo
diamond/2.0.15-h7xx24l
dicombrowser/20181217s-ikvqhyr
dlib/19.22-lxah7rq
dmtcp/3.0.0-xvfukfp
dorado/0.8.2-s42dhri
dos2unix/7.4.2-5a6dlgt
dotnet/8.0.100-5lr7bga
dropest/0.8.6-ewwx5ik
ds/9.8.5s-zpqg2jy
dsi-studio/chen-2023-sif-lytwlk2
dtitk/2.3.1s-bp7yqjh
eigen/3.4.0-uycckhi
eigensoft/7.2.1-6ctbhoz
emacs/28.2-rwds2pd
expat/2.5.0-zujcztp
fastme/2.1.5.1-kmg5til
fastp/0.23.4-xmfbk37
fastq-screen/0.15.3-7ymgrux
fastqc/0.11.9-mvd2uhw
fastqc/0.12.1-sk2rb3a (D)
fasttree/2.1.11-o5kvig7
fastx-toolkit/0.0.14-zhaxiyn
ferret/7.6.0-rzhafh6
ffmpeg/6.0-fy677gn
ffmpeg/7.0-xny2fb2 (D)
fiji/20231107-1617-espdc7g
filezilla/3.49.1-epfjuus
flashpca/2.0-zr2wflq
freebayes/1.3.6-v7rppcd
freeglut/3.2.2-76qqoqn
freesurfer/7.3.2-zop5n6m
fsl/6.0.7.7s-bul4mby
fv/5.5.2-g2ibb5x
fzf/0.45.0-pdwl7a4
gatk/4.3.0.0-234wqft
gaussian/09_v1-u6klkps
gaussian/09-D01_v2-tw73726
gaussian/09-D01-TEST_v3-vv6ar67
gaussian/16-C01-bb2r2gh (D)
gaussview/v05-mkdyw6j
gcc/6.5.0-lwshmxc
gcc/10.1.0-mojgbnp
gcc/13.1.0-nvrtbp3 (D)
gcm/2.4.1-lfqoarh
gdal/3.7.0-4p4onmf
geeqie/2.4-6vdnc4v
geos/3.11.2-a6hfu6a
ghostscript/10.0.0-3atesdh
gimp/2.10.32-tlknk2n
git-lfs/3.3.0-laphnvj
git/2.44.0-6f7n7ni
glew/2.2.0-plawm2j
glm/0.9.9.8-m3s6sze
glpk/5.0-zifs7bb
gmap-gsnap/2024-08-20-dur7jyc
gmp/6.2.1-qlaig4m
gnuplot/5.4.3-pdiiquy
go/1.17.1-f4mqosa
go/1.20.3-xknmcqd
go/1.23.3-d3wvs6z (D)
google-cloud-cli/456.0.0-3mtj4z6
gperf/3.1-56q4xf5
grace/5.1.25-duvo7rn
graphviz/8.0.1-75znavc
gsl/2.7.1-khmyfcy
guppy/6.0.1-wpaqayj
guppy/6.1.2-wwvvdfu (D)
gurobi/10.0.1-q7rc5dw
hdf5/1.12.2-s6aacp3
hdf5/1.14.1-2-rdd6y6v (D)
hisat2/2.2.1-gn4pb3l
homer/4.11.1-fpjs4l4
hpcx-mpi/4.1.5rc2-mts-ukpby4i
hpcx-mpi/4.1.5rc2s-yflad4v (D)
htop/3.2.2-kqsjlaj
htslib/1.12-ecidzx4
htslib/1.17-zxcat2k (D)
idba/1.1.3-nrxiqtw
idemp/201706-a45gc3d
idl/8.8.2-d5p4srq
igraph/0.7.1-wbiepb3
imagej/154-linux64-java8-jd6sflr
imagemagick/7.1.1-3-ex4k4u2
inkscape/1.3s-gshcpwc
intel-oneapi-compilers/2023.1.0-a7fw7qt
intel-oneapi-mkl/2023.1.0-xbcd2g3
intltool/0.51.0-vanhjsr
iq-tree/2.1.3-gu64b4j
iq-tree/2.3.6-fn5vscb (D)
iraf/2.17.1s-2r7ypc5
itk-snap-container/4.0.2-bychj73
jags/4.3.1-4mvaxc3
jellyfish/2.2.7-dywzm7z
jo/1.9-ki7xc2u
json-fortran/8.3.0-ehkzpjv
jsoncpp/1.9.5-vhsa2iy
julia/1.9.3s-i3zndt3
julia/1.11.1s-kueea5s (D)
kraken/1.1.1-e6r2aej
lemon/1.3.1-jh3h4xt
leptonica/1.81.0-pebiyok
leveldb/1.23-f76iwfr
lftp/4.9.2-vimt4vf
libarchive/3.6.2-mnc5shn
libbeef/Nov2020-xhrdwg5
libdeflate/1.10-5yi7m3g
libgd/2.2.4-2iyhgxa
libgd/2.3.3-ubu4k2f (D)
libgeotiff/1.6.0-voueb6b
libgit2/1.6.4-a432pgi
libiconv/1.17-jwjcds2
libjpeg-turbo/2.1.5-sewtk5u
libjpeg/9e-6djp5nd
libnsl/1.3.0-calriiy
libnsl/2.0.1-ed2i5hn (D)
libpng/1.2.57s-lve65hz
libpng/1.5.30-ru3zswz
libpng/1.6.39-ryxiwrd (D)
libreoffice/7.2.2.sif-drpjygp
libsdl/2.30.7-4rxs72s
libtiff/4.5.0-g6fga7e
libtree/3.1.1-yxst452
libvips/8.13.3-ex4pfpg
libwnck/3.24.1-4gvyjhg
libxc/4.3.4-uy5ogwb
libxc/5.2.3-ncc5ir4 (D)
libzip/1.3.2-qwqikw6
liggghts/3.8.0s-rqph5mk
linaro-forge/23.1.2-pk2lobu
llvm/16.0.2-mq6g5lb
lmod/8.7.24-w2akdkb
mafft/7.505-iuicuiv
magma-usyd/V2.28-8-p3zylpg
magma/2.7.1-cpueyjy
maple/22-cp2uld4
mark/2018.07.08-43snzfu
materialstudio/2024s-gbc3dg6
mathematica/13.2.0-n4i6yua
matlab/R2019a-rjyk3ws
matlab/R2023a-xd6f7ph (D)
matlab/R2024b-ipaztju
maven/3.8.4-w3zgh4v
mercurial/5.8-vly6btb
mesa/22.1.6-6dbg5gq
meson/1.6.0-eipcwzq
metis/5.1.0-7qoahod
miniconda3/23.11.0s-odstpk5
miniforge/23.11.0-0s-hwmjdtj
minimap2/2.14-33hmvx2
molden/6.7-isryqwj
molden/7.3-kytvh3m (D)
molpro-mpi/2023.2.0s-vyfv74n
molpro-mpi/2024.3.1-mpipr-hwakoux (D)
mpc/1.3.1-zbino7j
mpfr/4.2.0-n2tkxso
mriconvert/2.1.0-oaq24fz
mricrogl/2022.07.20-n3b7whc
mricron/201909-3s2phrj
msmc2/2.1.4-cuac55f
multiwfn/3.8_1208-qn65pif
mummer4/4.0.0rc1-4llgadq
muscle/3.8.1551-pys2b76
mysql/8.0.29-w7xdbde
nanoflann/1.4.3-u2l24dv
nbo/7.0-phausw3
nccl/2.16.2-1-gjmprw5
ncdu/1.18.1-uofylp6
nco/5.1.5-36hru5t
ncview/2.1.8-nxepxtw
neovim/0.9.4-vygnfr2
netcdf-c/4.9.2-cfggqwi
netcdf-c/4.9.2-4ozokng (D)
netcdf-cxx4/4.3.1-6gcdg5s
netcdf-fortran/4.6.0-kl27oji
netcdf/4.9.2-ar77jpt
netlib-lapack/3.11.0-jdzmstx
netlogo/6.4.0-psm765m
netpbm/10.73.43-m2jdopk
ngc-jax/23.10-paxml-py3-ziphcif
ngc-pytorch/24.03-py3-a6ptiby
ngc-tensorflow/24.03-tf2-py3-lmnuwwg
ninja/1.11.1-k2aq3rl
nlopt/2.7.1-fwj27pk
nnn/4.9-r7kawsv
node-js/18.12.1-qkps4za
nvhpc/23.3-xa4nyqi
nvtop/3.0.1-7r22pjl
octopus-lunter/0.7.4-kkqrfv3
ollama/0.3.14s-a3gonhs
openbabel/3.1.1-nay2mkb
openblas/0.3.23-u6k5fey
opencv/4.6.0s-5z4piup
openexr/3.1.5-6fapou6
openjdk/11.0.17_8-nw5ylvi
openjdk/17.0.5_8-pq2e7ao (D)
openjpeg/2.5.0-iyu5vwb
openmpi/4.1.2-s5wtoqb
openmpi/4.1.4s-smqniuf
openmpi/4.1.5-hkgv3gi
openmpi/4.1.5-kzuexje (D)
openslide/3.4.1-pzjb2kl
openssl/1.1.1t-u2rkdft
or-tools/9.10-k4nov4d
ovito/3.6.0-rile7ax
p7zip/17.05-3xtimiz
pandoc/2.19.2-wawlx5m
pangolin/0.6-vwij3iv
parallel/20220522-5ah2i5h
paraview/5.9.0s-dgv24kr
patchelf/0.17.2-aqmx4qb
paup/4.0a168-cwt24ux
pcre2/10.42-xks64jg
pdftk/2.02-gu7lpeg
pdsh-chaos/23.12-t6ywlrp
perl-dbi/1.643-t74vmeb
perl/5.26.2-o4iq4b4
perl/5.36.0-bt34quz (D)
perl/5.37.9-og4osvm
perl/5.40.0-o7hxci2
picard/2.26.2-qabtyqy
pigz/2.7-zgdlry3
plink/1.9-beta6.27-nvy4vrx
plink/2.00-b6x44xw (D)
popoolation2/1.205s-luyjn2b
postgresql/16.4-vzmexkn
prodigal/2.6.3-vbq7usx
proj/9.2.0-ni5rcfb
protobuf/3.22.2-6hlkkut
py-ase/3.21.0-pyuljod
py-matplotlib/3.7.1-4afsjsz
py-statsmodels/0.13.2-sbdhj4k
py-sympy/1.11.1-gqgr7wu
pycharm-community/2021.3.3-weqrcly
pypy/7.3.13-6a5ma5j
python/3.9.16s-x3wdtvt
python/3.11.0s-ixrhc3q (D)
qgis/3.28.3-5axmqsj
qit/2023-04-04-grwuvgg
qmcpack-mpi/3.16.0s-qp2hymx
qscintilla/2.11.6-dq7zlcq
qt/5.15.9-fb7mjex
qualimap/2.2.1-mybpdoi
quantum-espresso-mpi/7.1-gits-v4bxgtv
quantum-espresso-mpi/7.1s-ia43pjk
quantum-espresso-mpi/7.3s-kydgjwo (D)
r/4.0.0-p7gxu4e
r/4.0.3-pvf2znb
r/4.1.0-bfjsvw5
r/4.2.2-z6qdiis
r/4.3.1-lmofgb4
r/4.4.0-yycctsj (D)
raisd/2.9-svyic22
rclone/1.62.2-o4lkrv6
readline/6.3-rnqups2
root/6.28.04-u7t5ax7
rsem/1.3.3-5obucw6
rstudio/2023.09.1-lsqy746
ruby/3.1.0-gnoxsfm
rust/1.73.0-647r2tw
rust/1.81.0-3qqoayc (D)
sage-container/10.3-avpqipf
sage/9.5-drpqjkh
sage/10.3-nntihfr (D)
salmon/1.9.0-itdua6n
salmon/1.10.1-43ljn7g (D)
samtools/1.12-4v4uiz6
samtools/1.16.1-txuglks (D)
sas/9.4m8-idx4uxl
schmutzi-container/1.5.7-vsorpcq
schmutzi-container/1.5.7-3imwf7h (D)
schrodinger/2023-4-h3kvbn3
schrodinger/2024-1-yqi27-m4qqm46 (D)
scons/4.5.2-housgyw
seqkit/0.10.1-qtiftw4
seqtk/1.3-kbdjwob
shapeit4/4.2.2-3us45un
singular/4.4.0-aeloppr
skewer/0.2.2-nwhklgr
slicer/5.4.0-rb2kk4l
slim/4.0.1-kymgtmu
slim/4.3-u22vcwu (D)
spdlog/1.11.0-qbi24my
splash/2.1.4-unrsfpj
spm/8-77b5myx
spm/12_r7606-prcq7fg (D)
sratoolkit/3.0.0-u4jvgps
stacks/2.65-geg4r7a
star/2.7.10b-fj6kao2
stata/mp17-v7a7uoo
stata/mp18-3wq5b4o (D)
stow/2.4.0-y2q7tsn
stringtie/2.2.1-7uti3ny
sublime-text/4.4143-im3loi3
subread/2.0.2-5agghnd
swig/4.1.1-bq46cxl
synopsys/2023.12-df4a3ab
synopsys/2024.09-q3jwzot (D)
tabix/2013-12-16-d6qvxp7
tcsh/6.24.10-dtqo5ky
tecplot/2022r1-q5cg2zq
tesseract/4.1.1-l2ejycz
tesseract/5.3.3-vq3altt (D)
texlive/20220321-pocclov
texstudio/3.0.1-64vxo64
tmux/3.3a-zyhjvvh
tn93/1.0.12-tcvbyl4
tree/2.1.0-7tlhzo7
trimal/1.4.1-ace7du2
trimgalore/0.6.6-iwfrq4c
trimgalore/0.6.9-hisz5xp (D)
trimmomatic/0.39-w5jnhai
udunits/2.2.28-rycabdx
usearch/11.0.667-wx6utmj
v8/3.14.5-aompxje
vasp-mpi/5.4.4-mdh3hpy
vasp-mpi/6.3.2_avandewa-chn3w3j
vasp-mpi/6.4.2_cfgoldsm_vtst-cff5qmk
vasp-mpi/6.4.2_cfgoldsm-7krhcss
vasp-mpi/6.4.3_yqi27-6uzdgwn (D)
vcftools/0.1.14-syssqsi
vim/9.1.0867-wl3haj7
virtualgl/3.1-yphbrfj
visit-container/3.3.3-qz3dni6
visit-mpi/3.3.3s-lz2dp7m
vmd/1.9.3-oin2dnj
vscode/1.84.2-4tfimgp
wcstools/3.9.7-lo4forb
wxwidgets/3.2.2.1-mk5eiyq
xcrysden/1.5.60-nuxe46i
xeyes/1.2.0-nge56yb
xgboost/1.6.2-fp3ii65
yaml-cpp/0.7.0-6nno2ru
zlib/1.2.13-jv5y5e7
zoxide/0.9.2-ydhigq6
zstd/1.5.5-zokfqsc