Currently Available Modules
If you require a software package that is not currently available on the Oscar cluster, please contact ICERM's IT staff and we will work with CCV to get the software installed.
This list is current as of November 10, 2021. To see the most up to date list of software modules, log into your Oscar account and run the command module avail.
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bxh_xcede_tools/1.11.14 confocal/1.0 potfit/20201014
cesm_post_process/Oct18 pigz/2.4
~~~~~~~~~~~~~~~~~~~~~~ category: Microstructure modeling ~~~~~~~~~~~~~~~~~~~~~~
oof2/2.1.17
~~~~~~~~~~~~~~~~~~~~~~~~~ category: access controlled ~~~~~~~~~~~~~~~~~~~~~~~~~
Molpro/2012.1.15
Molpro/2015_gcc
Molpro/2015_serial
Molpro/2018.2_ga
Molpro/2019.2
Molpro/2019.2_ga
Molpro/2020.1
Molpro/2020.1_ga
Molpro/2020.1_openmpi_4.0.5_gcc_10.2_slurm20
gaussian/g09
gaussian/g09-D01
gaussian/g09-D01-TEST
vasp/5.4.1
vasp/5.4.1_debug
vasp/5.4.1_mvapich2-2.3.5_intel_2020.2_slurm20
vasp/5.4.4
vasp/5.4.4_intel
vasp/5.4.4_mvapich2-2.3.5_intel_2020.2_slurm20
vasp/5.4.4_openmpi_4.0.5_gcc_10.2_slurm20
vasp/5.4.4a
vasp/6.1.1_ompi405_yqi27
vasp/6.1.1_openmpi_4.0.5_intel_2020.2_yqi27_slurm20
vasp/6.1.1_yqi27
~~~~~~~~~~~~~~~~~~~~~~~~ category: graph partitioning ~~~~~~~~~~~~~~~~~~~~~~~~~
metis/5.1.0 parmetis/4.0.3 scotch/6.0.4
~~~~~~~~~~~~~~~~~~~~~~~~~ category: image processing ~~~~~~~~~~~~~~~~~~~~~~~~~~
multinest/3.10 openslide/3.4.1 pstokes/1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: libraries ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
astropy/3.2.1 cudnn/7.4 flann/1.8.4 lapack/3.7.0
astroquery/3.0.9 cudnn/7.6 hnn/1.0 mumps/5.0.2
blas/3.7.0 cudnn/7.6.5 horovod/0.16 mumps/5.0.2-seq
cudnn/5.1 cudnn/8.1.0 horovod/0.19.5 pcl/1.9.1
cudnn/6.0 cudnn/8.2.0 lapack/3.4.2 pcl/1.9.1_nurbs
cudnn/7.0 dlib/19.17 lapack/3.6.0 scalapack/2.0.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: library ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
openslide-python/1.1.1
~~~~~~~~~~~~~~~~~~~~~~~~~ category: machine learning ~~~~~~~~~~~~~~~~~~~~~~~~~~
keras/2.0.9 keras/2.1.3_py3 nccl/2.8.4
keras/2.1.1 nccl/2.4.7
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: math ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gsl/1.15 gsl/2.3 gsl/2.5
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: package ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
subread/1.6.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: software ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mriconvert/2.1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: utility ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mriconvert/2.1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: visualization ~~~~~~~~~~~~~~~~~~~~~~~~~~~
mayavi/4.6.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: (none) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
HiC-Pro/2.7.8 jo/1.4 repeatmasker/4.1.0
HiC-Pro~/2.10.0 libsodium/1.0.17 repeatmodeler/1.0.11
awscli/1.0 mumax/3.9.3 sdl2/2.0.12
basilisk/1.0 ncl/6.4.0 siesta/3.2
canu/1.7.1 neuron/7.5 siesta/4.1
dropest/0.86 neuron/7.7 skewer/0.2.1
fiji/2017-java6 neuron/7.7_mpi squashfs/4.3
fiji/2020 nvidia-driver/440.33.01 tmux/2.8
fmri/20.0.0 pdflib/7.0.5 topcat/4.7
fv/5.5 pypy/6.0.0_2.7 transrate/1.0.3
gcm-core/2.0.498 pypy/6.0.0_3.5 vscode/1.22
grads/2.2.0 pypy/7.3.0_3.6 zstd/1.5.0
hotnet/1.0 repeatmasker/4.0.7
~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Applied Maths ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
oof2/2.1.17
~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Astrophysics ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
polychord/1.0 polychord/2.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Bioinformatics ~~~~~~~~~~~~~~~~~~~~~~~~~~~
MultiQC/1.0 muscle/3.8.31
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: CAD ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
freecad/0.18 librecad/2.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Chemistry ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
dalton/2018.0
dalton/2018.0_mvapich2-2.3.5_intel_2020.2_slurm20
~~~~~~~~~~~~~~~~~~~~~~~ category: Computer Architecture ~~~~~~~~~~~~~~~~~~~~~~~~
risc/1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: EDA tools ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cadence/IC06.18.090 cadence/IC6.1.8.33 incisive/15.20.085
~~~~~~~~~~~~~~~~~~~~ category: Executable for ceckpointings ~~~~~~~~~~~~~~~~~~~~
dmtcp/2.6.0
~~~~~~~~~~~~~~~~~~~ category: Flag for CMAKE for fast build ~~~~~~~~~~~~~~~~~~~~
ninja/1.9.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: GENETEICS ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
eigensoft/6.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Genomic ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Genrich/0.5 mcscanx/1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Genomic Library ~~~~~~~~~~~~~~~~~~~~~~~~~~~
redundans/1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Genomics ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
baypass/2.2 beast/2.5.2 kissplice/2.5.1
beast/1.10.4 kissplice/2.5.0
~~~~~~~~~~~~~~~~~~~ category: Genomics Sequencing Alignment ~~~~~~~~~~~~~~~~~~~~
qualimap/2.2.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Graphics ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
beagle/1.0.0
~~~~~~~~~~~~~~~~~~~~~~~~ category: Helper function type ~~~~~~~~~~~~~~~~~~~~~~~~
datamash/1.3
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: I/O ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cdo/1.9.8
cdo/1.9.9
hdf5/1.10.0
hdf5/1.10.1_mvapich2-2.3.5_gcc_10.2_slurm20
hdf5/1.10.1_parallel
hdf5/1.10.5
hdf5/1.10.5_fortran
hdf5/1.10.5_mvapich2-2.3.5_intel_2020.2_slurm20
hdf5/1.10.5_openmpi_3.1.3_gcc
hdf5/1.10.5_openmpi_3.1.6_gcc
hdf5/1.10.5_openmpi_4.0.0_gcc
hdf5/1.10.5_openmpi_4.0.5_gcc_10.2_slurm20
hdf5/1.10.5_parallel
hdf5/1.10.7_hpcx_2.7.0_intel_2020.2_slurm20
hdf5/1.10.7_openmpi_4.0.5_gcc_10.2_slurm20
hdf5/1.10.7_openmpi_4.0.5_intel_2020.2_slurm20
hdf5/1.12.0_hpcx_2.7.0_intel_2020.2
hdf5/1.12.0_hpcx_2.7.0_intel_2020.2_slurm20
hdf5/1.12.0_openmpi_4.0.5_intel_2020.2_slurm20
jasper/1.900.1-intel
nco/4.6.6
nco/4.8.2
nco/4.9.3
netcdf/3.6.3
netcdf/4.4.1.1_gcc
netcdf/4.4.1.1_intel
netcdf/4.4.1.1_pgi
netcdf/4.7.0_intel2019.3
netcdf/4.7.4_gcc8.3
netcdf/4.7.4_gcc_10.2_hdf5_1.10.5
netcdf/4.7.4_intel_2020.2_hdf5_1.12.0
sqlite/3.25.2
sqlite/3.31.1
udunits/1.12.11
udunits/2.2.24
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: IDE ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
meshlab/20190129_qt59 spyder/3.3.5
~~~~~~~~~~~~~~~~~ category: Image processing and visualization ~~~~~~~~~~~~~~~~~
opencv-python/4.1.0.25
~~~~~~~~~~~~~~~~~~~~~~~ category: Library for optimizer ~~~~~~~~~~~~~~~~~~~~~~~~
numbbo/2.3_python2 numbbo/2.3_python3
~ category: Material sceince: https://icet.materialsmodeling.org/overview.html ~
icet/0.3
~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Medical imaging ~~~~~~~~~~~~~~~~~~~~~~~~~~~
mricrogl/1.0 mricrogl/1.2.20210317
~~~~~~~~~~~~~~~ category: Multifunctional Wavefunction Analyzer ~~~~~~~~~~~~~~~~
multiwfn/3.3.9
~~~~~~~~~~~~~~~~~~~~~~~~~ category: Numerical Library ~~~~~~~~~~~~~~~~~~~~~~~~~~
ngsolve/6.2.1901
~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Numerical Solver ~~~~~~~~~~~~~~~~~~~~~~~~~~
dedalus/2.1810
dedalus/2.1905
dedalus/2.1905_openmpi_4.05_gcc_10.2_slurm20
dedalus/Sep2019
nektar++/4.5.0
~~~~~~~~~~~~~~~~~~~~~~~~ category: Quantum Monte Carlo ~~~~~~~~~~~~~~~~~~~~~~~~~
casino/2.13
~~~~~~~~~~~~~~~~~~~~ category: Tool for Image Manipulation ~~~~~~~~~~~~~~~~~~~~~
netpbm/10.47.71
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: Utility ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
globus/1.11
~~~~~~~~~~~~~~~ category: Visualization Package Qt's Python API ~~~~~~~~~~~~~~~~
pyqt/4.12.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: X ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
turbovnc/2.1.1 turbovnc/2.2.1 turbovnc/2.2.6 turbovnc/2.2.b1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: astronomy ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ares/0.1 iraf/2.16 sextractor/2.8.6
ares/0.5 iraf/2.16.1+2018.11.01 supermongo/2.4.34
ccfits/2.5 lsst/14.0 swarp/2.38
cfitsio/3.450 planck_likelihood/3.0 theli/1.9.5
cfitsio/3.48 planck_likelihood/3.01 wcstools/3.9.5
ds9/7.6 scamp/2.0.4
galfit/3.0.5 sextractor/2.19.5
~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: astrophysics ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fiat/Oct2019
~~~~~~~~~~~~~~~~~~~~~~~~~ category: astropy computing ~~~~~~~~~~~~~~~~~~~~~~~~~~
astropy/3.2.1
~~~~~~~~~~~~~~~~~~~~~~~~ category: astroquery computing ~~~~~~~~~~~~~~~~~~~~~~~~
astroquery/3.0.9
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: benchmark ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
elbencho/2.0-1
~~~~~~~~~~~~~~~~~~~~~ category: binary for genome studies ~~~~~~~~~~~~~~~~~~~~~~
bedGraphToBigWig/1.04
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: bio ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SNAP/2013-11-29 mira/4.0.2
abyss/2.1.1 mne/0.17.0
ale/20140120 moseq2/0.1.2
aliview/1.25 moseq2/0.2.0
amplisat/20170208 mothur/1.39.5
angsd/0.920 mrbayes/3.2.6
anvio/5.2 mriqc/0.15.2
anvio/5.5 msmc/1.0.0
anvio/6.1 msmc/1.1.0
anvio/7 msmc/2.1.2
arb/6.0.6 msprime/0.7.0
augustus/3.3 msprime/0.7.2
bamcleave/Oct2018 msprime/0.7.4
bamtools/2.3.0 mummer/4.0.0.beta2
bamtools/2.4.1 namd/2.11-multicore
bbmap/38.23 namd/2.13b1-multicore
bbtools/38.12 nda-tools/1.0
bcftools/1.10.2 nextclip/1.3.1
bcftools/1.13 nextgenmap/0.5.2
bcftools/1.9 nipype/1.5.0
bcl2fastq/2.20.0 nseg/20181012
bedops/2.4.35 nvtop/1.1.0
bedtools/2.25.0 obitools/1.2.12
bedtools/2.26.0 octopus/0.7.4
beeline/1.0 oligotyping/2.0
biolite/1.0.0 omero/5.6.2
biomed/1.0 opera/2.0.6
biopython/1.66 orthomcl/2.0.9
biopython/1.73 paml/4.8
bismark/0.20.0 pandaseq/2.11
blast/2.2.30+ paris/1.1.3
blast/2.6.0+ paup/4.0a157
blast/2.7.1+ paup/4.0a166
blast/2.8.1+ paup/4.0a168
blast/2.9.0+ pbsuite/15.8.24
blat/36x2 pcangsd/0.98
bowtie/1.2.0 picard-tools/2.17.11
bowtie/2.4.1 picard-tools/2.9.2
bowtie2/2.3.0 pilon/1.22
bowtie2/2.3.5.1 pilon/1.24
bowtie2/2.4.2 plink/1.07
braker/2.1.0 plink/1.90
busco/3.0.2 plink/2.00
bwa/0.7.15 polyphen/2.2.2
cabana/1.0 poolparty/0.8
cabana/1.1_hpcx_2.7.0_gcc_10.2_slurm20 popoolation2/1.201
cantera/5.9.7 prinseq/0.20.4
ccp4/7.0 prodigal/2.6.3
circlator/1.5.5 psmc/0.6.5
conn/16b psmc/0.6.5a
conn/18a pymol/2.2b
conn/18b qctool/2.0
conn/18b_runtime qiime/1.9.1
conn/18b_standalone quast/5.0.0
conn/19c raremetal/4.14.1
conn/20b raxml/8.2.10
conn/20b_standalone raxml-ng/0.9.0
connectome_workbench/1.3.1 recon/1.08
connectome_workbench/1.3.2 repeatscout/1.0.5
connectome_workbench/1.4.2 revbayes/1.0.5
cpac/1.0.1 revbayes/1.0.6
cpac/1.5.0 rmblastn/2.10.0
cufflinks/2.2.1 rmblastn/2.6.0
cutadapt/1.14 rsem/1.3.1
dada2/1.4.1 salmon/0.11.3
dada2/1.8 salmon/0.8.2
dbg2olc/Sep2018 salmon/1.0.0
dendropy/4.2.0 salmon/1.2.0
diamond/0.9.12 salmon/1.3.0
diamond/0.9.24 samblaster/0.1.24
diamond/2.0.8 samtools/0.1.18
dida/1.0.1 samtools/1.10
diffreps/1.55.6 samtools/1.12
dlcpar/1.1 samtools/1.13
edge-pro/1.3.1 samtools/1.2
eems/1.0 samtools/1.3.1
emboss/6.6.0 samtools/1.4.1
entap/0.8.1-beta samtools/1.9
entap/0.8.4-beta schrodinger/2017-3
exonerate/2.2.0 schrodinger/2020-1
fastme/2.1.5 schrodinger/2020-3
fastqc/0.11.5 schrodinger/2021-1
fastsimcoal/2 schrodinger/2021-3
fasttree/2.1.10 selscan/1.2.0a
fasttree/2.1.11 seqkit/0.10.1
fastuniq/1.1 seqtk/1.3
fastx-toolkit/2.6 sga/0.10.15
fgap/1.8.1 sift/6.2.1
fgbio/0.6.1 sift4g/2.0.0
figtree/1.4.4 sjaracne/0.2.0
flashpca/2.0 skesa/1.68
freebayes/1.1.0 slicer/4.10.0
freebayes/1.2.0 slim/3.1
garlic/1.1.6 slim/3.2.1
gatk/4.0.9.0 slim/3.3
gatk/4.1.6.0 snippy/Oct2017
gatk/4.2.2.0 spades/3.10.1
gdcclient/1.4.0 spades/3.13.0
genemark/4.33 span/0.10.0.4787
guppy/4.0.11 spm/spm12
guppy/4.2.2 spm/spm12_7771
guppy/5.0.7 sprint/0.1.8
hapbin/1.3.0 sratoolkit/2.10.5
hisat2/2.1.0 sratoolkit/2.11.0
hmmer/3.1b2 sratoolkit/2.8.2-1
homer/4.10 stacks/2.2
hotnet2/1.2.1 stampy/1.0.32
htseq/0.11.1 star/2.6.1b
htseq/0.9.1 star/2.7.2a
idba/1.1.3 star/2.7.3a
idemp/20180928 starfusion/1.7.0
ilash/1.0.0 starfusion/1.8.1
ilash/1.0.2 stringtie/1.3.3b
interproscan/5.26-65.0 stringtie/1.3.4d
interproscan/5.27-66.0 tabix/0.2.6
interproscan/5.28-67.0 tablemaker/2.1.1
interproscan/5.32-71.0 taxonkit/0.3.0
interproscan/5.33-72.0 tophat/2.1.1
iq-tree/1.6.7 transabyss/2.0.1
iq-tree/2.0.6 transindel/20181017
jellyfish/1.1.11 trf/4.09
jellyfish/2.2.10 trimal/1.4
kneaddata/0.6.1 trimgalore/0.5.0
kraken/2.0.7-beta trimmomatic/0.36
kraken/2.0.9-beta trinity/2.11.0
kraken/2.1.2 trinity/2.4.0
last/956 trinity/2.8.4
macs/2.1.1 usearch/5.2.32
macs/2.2.6 usearch/8.1.1861
mafft/7.310-with-extensions varscan/2.3.9
maker/2.31.10 vcftools/0.1.16
marsbar/0.42 velvet/1.2.10
maxbin2/2.2.5 velvet/1.2.10a
megahit/1.1.3 vep/101
meraculous/2.2.6 vep/104
metabat/2.12.1 viennarna/2.4.9
metaphlan/2.6.0 vmd/1.9.3
metavelvet/1.2.01 vsearch/2.11.1
migrate/3.6.11 weblogo/2.8.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: bio packages ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bwameth/0.10
~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: bioinformatics ~~~~~~~~~~~~~~~~~~~~~~~~~~~
umitools/1.0.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: biology ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
haplostrips/1.2.1 htslib/1.9 meme/5.0.5 mmsplice/0.2.7
htslib/1.13 libBigWig/0.4.4 meme/5.3.0 wiggletools/1.2.3
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: build tool ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
scons/3.0.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: cave ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gigapixelviewer/alpha minvr/dev_ben vrg3d/265_compat
minvr/0.3master planetaryviewer/alpha vrg3d/265_demos
minvr/0.4 scalable/20150828 vrpn/7.33
minvr/beta scalable/opengl32+
minvr/beta-bleeding vrg3d/265
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: chemistry ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Molpro/2012.1.15
Molpro/2015_gcc
Molpro/2015_serial
Molpro/2018.2_ga
Molpro/2019.2
Molpro/2019.2_ga
Molpro/2020.1
Molpro/2020.1_ga
Molpro/2020.1_openmpi_4.0.5_gcc_10.2_slurm20
ambertools/amber16
ambertools/amber16-gpu
ambertools/amber17
ambertools/amber17_lic
ambertools/amber21
ase/3.13.0
ase/3.19.1
ase/3.8.1
bagel/1.2.2
cp2k/7.1
cp2k/8.1.0
crossrate/2016.3.23
dacapo/2.7.16_mvapich2_intel
dice/1.0
elk/5.2.14
gaussian/g09
gaussian/g09-D01
gaussian/g09-D01-TEST
gaussview/14Aug20
gromacs/2016.6
gromacs/2018.2
gromacs/2018.2_gpu
gromacs/2018.2_hpcx_2.7.0_gcc_10.2_slurm20
gromacs/2020.1
gromacs/2020.1_hpcx_2.7.0_gcc_10.2_slurm20
gromacs/2020.4_gpu
gromacs/2020.4_gpu_hpcx_2.7.0_gcc_10.2_slurm20
gromacs/2020.4_hpcx_2.7.0_gcc_10.2_slurm20
hande/1.1.1
hande/1.1.1_64
hande/1.1.1_debug
hotbit/10mar17
lammps/11Aug17_serial
lammps/29Oct20_openmpi_4.0.5_gcc_10.2_slurm20
medea/3.2.3.0
molden/5.7
mrcc/2014-intel
mrcc/2014-intel-threaded
mrcc/2018-intel
mrcc/2018-intel-threaded
mrcc/2020
n2p2/1.0.0
n2p2/2.0.0
n2p2/2.0.0_hpcx
nbo/7.0
nwchem/6.8-openmpi
nwchem/7.0
nwchem/7.0.2_mvapich2-2.3.5_intel_2020.2_slurm20
openbabel/2.4.1
openbabel/3.0.0
openmolcas/18.09.617
orca/4.0.1.2
orca/4.1.1
orca/4.2.1
orca/5.0.0
orca/5.0.1
prophet/augustegm_1.2
pyscf/1.4.7
pyscf/1.6.3
qchem/5.0.2
qchem/5.0.2-openmpi
qmcpack/3.10.0_openmpi_4.0.5_intel_2020.2_slurm20
qmcpack/3.7.0
qmcpack/3.9.1
qmcpack/3.9.1_openmpi_3.1.6
qmcpack/3.9.2_hpcx_2.7.0_gcc_10.2_slurm20
qmcpack/3.9.2_intel_2020
qmcpack/3.9.2_openmpi_4.0.0_gcc_8.3_slurm20
qmcpack/3.9.2_openmpi_4.0.0_gcc_8.3_slurm20_complex
qmcpack/3.9.2_openmpi_4.0.1_gcc
qmcpack/3.9.2_openmpi_4.0.4_gcc
qmcpack/3.9.2_openmpi_4.0.5_intel_2020.2_slurm20
quantumespresso/6.1
quantumespresso/6.3
quantumespresso/6.4
quantumespresso/6.4.1
quantumespresso/6.4_openmpi_4.0.0_gcc_8.3_slurm20
quantumespresso/6.4_openmpi_4.0.5_intel_2020.2_slurm20
quantumespresso/6.4_openmpi_4.0.5_intel_slurm20
quantumespresso/6.5
quantumespresso/6.5_openmpi_4.0.5_intel_slurm20
quantumespresso/6.6
quantumespresso/6.6_openmpi_4.0.5_intel_2020.2_slurm20
rotd/2014-11-15_mvapich2
schrodinger/2017-3
schrodinger/2020-1
schrodinger/2020-3
schrodinger/2021-1
schrodinger/2021-3
sharc/2.0
sharc/2.1.1
sharc/2.1.1_intel
vasp/5.4.1
vasp/5.4.1_debug
vasp/5.4.1_mvapich2-2.3.5_intel_2020.2_slurm20
vasp/5.4.4
vasp/5.4.4_intel
vasp/5.4.4_mvapich2-2.3.5_intel_2020.2_slurm20
vasp/5.4.4_openmpi_4.0.5_gcc_10.2_slurm20
vasp/5.4.4a
vasp/6.1.1_ompi405_yqi27
vasp/6.1.1_openmpi_4.0.5_intel_2020.2_yqi27_slurm20
vasp/6.1.1_yqi27
xcrysden/1.5.60
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: class ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
class/1435
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: clients ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
aspera/3.8.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: climate ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cesm/1.2.1 cesm/2.1.1 esmf/8.0.0 esmf/8.1.0b11
cesm/1.2.2 esmf/7.1.0r esmf/8.0.0b esmf/8.1.9b17
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: compilers ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Xvfb/1.20.12 gcc/10.2 java/8u111
clang/3.9.1 gcc/4.5.4 java/jdk-11.0.11
clang/7.0.0 gcc/4.7.2 java/jdk-12.0.2
clang/7.1.0 gcc/4.9.4 kokkos/3.3.1
cuda/10.0.130 gcc/5.4 kokkos/3.4.1
cuda/10.1.105 gcc/6.2 llvm/11.0.1
cuda/10.2 gcc/6.3 llvm/3.8.1
cuda/11.1.1 gcc/7.2 llvm/4.0.0
cuda/11.1.1_intel_2020 gcc/8.3 llvm/6.0.1
cuda/11.3.1 intel/2011.11.339 llvm/7.1.0
cuda/7.5.18 intel/2013.1.106 nag/6.2
cuda/8.0.61 intel/2017.0 nag/mbl6i25dnl
cuda/9.0.176 intel/2018.1 pgi/16.7
cuda/9.1.85.1 intel/2019.3 pgi/2019
cuda/9.2.148 intel/2020.2 swig/3.0.10
~~~~~~~~~~~~~~~~~~~~~~~ category: computer architecture ~~~~~~~~~~~~~~~~~~~~~~~~
llvmOpenmp/1.0 llvmOpenmp/2.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: containers ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
singularity2/2.5.2
~~~~~~ category: cross webbrowser web application development environment ~~~~~~
chromedriver/2.46
~~~~~~~~~~~~~~ category: data analysis(http://www.mega-nerd.com/) ~~~~~~~~~~~~~~
libsnd/1.0.28
~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: data science ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
catboost/0.8.1 manureadr/1.0 pandas/py_3.6.6
catboost/0.8.1_py3 pandas/py_3.5.2
~~~~~~~~~~~~~~~~~~~~~~~ category: data structure library ~~~~~~~~~~~~~~~~~~~~~~~
dcm2bids/2.1.4
~~~~~~~~~~~~~~~~~~~~~~ category: debugging and profiling ~~~~~~~~~~~~~~~~~~~~~~~
forge/18.2.3 forge/19.1.2 forge/21.0.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: dev ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
googletest/1.8.0 qemu/4.1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: devel ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bazel/0.23.0 glew/1.13.0 opengl/nvidia-375.66
bazel/0.25.2 glew/2.1.0 opengl/nvidia-390.30
bazel/0.4.4 opengl/mesa-12.0.6 opengl/nvidia-410.72
bazel/0.5.4 opengl/mesa-18.3.3 protobuf/3.4.1
bazel/1.2.1 opengl/nvidia protobuf/3.6.0_gcc5.4
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: editor ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
emacs/26.3 neovim/0.4.4
~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: engineering ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
abaqus/2017 comsol/5.6
abaqus/2021 mentor-calibre/2020.1_36.18
abaqus/2021.1 spectre/191
abaqus/2021.1_intel17 su2/7.0.2
abaqus/6.12sp2 synopsys/2018.06
ansys/18.1 synopsys/2020.06
assura/04.16.107 synopsys/L_2016.03-SP2
comsol/5.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: fMRI ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
brainiak/Feb2018
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: fonts ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
freetype/2.7.1
~~~~~~~~~~~~~~~~~~~~~~~ category: gene and species tree ~~~~~~~~~~~~~~~~~~~~~~~~
phyldog/1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: genetics ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
megacc/10.1.8
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: genomic ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
admixture/1.3.0 glactools/1.0.7 pybigwig/0.3.15
deeptools/3.2.1 partitionfinder/2.1.1 pysam/0.15.2
deeptoolsintervals/0.1.7 py2bit/0.3.0 pyslim/1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: genomics ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cellranger/3.1.0 cellranger/arc-1.0.1 faststructure/1.0
cellranger/5.0.1 chromopainter/0.0.4 relernn/6Dec2019
cellranger/6.0.0 clustal_omega/1.2.4
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: graphics ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
campari/3.0 gnuplot/5.2.3 inkscape/Sep-2019
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: image ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
c3d/1.0.0 imagej/1.52a leptonica/1.79.0 openexr/2.2.1
ffmpeg/3.2.4 imagemagick/7.0.7 libgd/2.2.5
ffmpeg/4.0.1 isis/3.5.1 libgit/1.1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~ category: image converter ~~~~~~~~~~~~~~~~~~~~~~~~~~~
mriconvert/2.1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~ category: image processing ~~~~~~~~~~~~~~~~~~~~~~~~~~
libgif/5.1.9 libjpeg-turbo/2.0.2 openjpeg/2.3.1
libjpeg/9.0 mayavi/4.6.0 openslide-python/1.1.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: languages ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
R/3.3.2 julia/1.0 miniconda/4.10
R/3.4.0 julia/1.0.2 perl/5.16.0
R/3.4.3 julia/1.1.0 perl/5.18.2
R/3.4.3_mkl julia/1.2.0 perl/5.24.1
R/3.4.4 julia/1.4.1 perl/5.30.0
R/3.5.2 julia/1.4.2 perl/5.8.9
R/3.6.0 julia/1.5.0 python/2.7.12
R/3.6.3 julia/1.5.1 python/2.7.12_clean
R/4.0.0 julia/1.5.2 python/2.7.16
R/4.0.3 julia/1.5.3 python/3.5.2
R/4.0.5 julia/1.5.4 python/3.6.6
R/4.1.0 julia/1.6.0 python/3.6.6_test
anaconda/2-4.3.0 julia/1.6.1 python/3.6.8_gcc8.3
anaconda/2-5.3.0 julia/1.6.2 python/3.7.4
anaconda/2020.02 julia/1.6.3 python/3.8.12_gcc8.3
anaconda/3-4.3.0 lua/5.3.4 python/3.9.0
anaconda/3-5.2.0 maple/16 qt/3.3.8b
golang/1.15.6 maple/20 qt/3.3.8b-51
golang/1.16.6 materialstudio/2020 qt/5.10.1
golang/1.17.1 mathematica/10.3.1 qt/5.12
idl/8.5.1 mathematica/11.0 qt/5.12.0
idl_DEEPS/8.7.2 mathematica/12.0 qt/5.13.1
java/8u111 matlab/R2016a qt/5.14.2
java/jdk-11.0.11 matlab/R2017a qt/5.7.0
java/jdk-12.0.2 matlab/R2017b qt/5.9.0
julia/0.5.1 matlab/R2018a ruby/2.4.0
julia/0.6.1 matlab/R2018b rust/1.45.1
julia/0.6.4 matlab/R2019a rust/1.50.1
julia/0.7.0 matlab/R2021a scala/2.12.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: lib ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
lftp/4.8.4
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: libraries ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Xvfb/1.20.12
acml/5.2.0-gfortran
agalma/1.0.0
armadillo/9.200.4
assimp/4.1.0
assimp/5.0.0
blast-legacy/2.2.26
boost/1.44.0
boost/1.49.0
boost/1.55
boost/1.57
boost/1.62.0-intel
boost/1.63.0
boost/1.68
boost/1.69
boost/1.75.0_openmpi_4.0.5_intel_2020.2_slurm20
boost/1.76.0_hpcx_2.7.0_gcc_10.2_slurm20
boost/1.76.0_hpcx_2.7.0_intel_2020.2_slurm20
bzip2/1.0.2
c-blosc/1.16.3
cdhit/4.6.8
cuda/10.0.130
cuda/10.1.105
cuda/10.2
cuda/11.1.1
cuda/11.1.1_intel_2020
cuda/11.3.1
cuda/7.5.18
cuda/8.0.61
cuda/9.0.176
cuda/9.1.85.1
cuda/9.2.148
ea-utils/1.04.807
fabm/1.0.2
fastq-tools/0.8
fftw/2.1.5
fftw/2.1.5-double
fftw/3.3.6
fftw/3.3.8
fftw/3.3.8a
freeglut/3.0.0
geos/3.4.2
geos/3.7.1
geos/3.8.1
gerris/1.0
global_arrays/5.6.1
global_arrays/5.6.1_i8
global_arrays/5.6.1_openmpi_2.0.3
global_arrays/5.8_openmpi_4.0.5_gcc_10.2_slurm20
gmp/6.1.2
gsl/1.15
gsl/2.3
gsl/2.5
igraph/0.7.1
keras/2.0.9
keras/2.1.1
keras/2.1.3_py3
lemon/1.3.1
leveldb/1.20
libcutensor/10.2
libflint/2.7.1
libint/2.5.0
libpng12/1.2.57
libspatialindex/1.9.3
libtiff/4.0.10
libxc/4.3.4
libzip/0.9-3.1.el6
lp_solve/5.5.2.5
metis/5.1.0
mpfr/3.1.5
mpfr/4.0.2
mpi4py/3.0.1_py3.6.8
mxnet/1.3.0
node.js/14.16.0
node.js/6.10.3
occa/1.2
openblas/0.2.19
openblas/0.2.8
openblas/0.3.7
opencv/3.2.0
opencv/3.4.1
parmetis/4.0.3
pcre2/10.35
phylobales/1.8b
proj/4.9.3
proj/5.2.0
proj/7.0.0
pytorch/1.3.1
sparsehash/2.0.2
suiteparse/4.5.4
sysstat/12.5.4
tensorflow/1.1.0_cpu
tensorflow/1.1.0_gpu
tensorflow/1.13.1_cpu_py3
tensorflow/1.13.1_gpu
tensorflow/1.13.1_gpu_keras
tensorflow/1.13.1_gpu_py3
tensorflow/1.14.0_gpu_py36
tensorflow/1.4.1_cpu
tensorflow/1.4.1_cpu_py3
tensorflow/1.4.1_gpu
tensorflow/1.4.1_gpu_py3
tensorflow/1.4.1_gpu_py3_cuda9.1
tensorflow/1.5.0_cpu_py3
tensorflow/1.5.0_gpu
tensorflow/1.5.0_gpu_py3
tensorflow/2.0.0_cpu_py37
tensorflow/2.0.0_gpu_py37
theano/1.0.1_py3
transdecoder/5.4.0
v8/3.14.5
voro++/0.4.6
vrpn/7.33
whatshap/Sep2018
xeyes/1.0
xz/5.2.4
yaml-cpp/0.6.2
yaml-cpp/0.6.2_intel2019.3
yaml-cpp/0.6.3_intel_2020.2
zlib/1.2.11
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: library ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
catch2/2.3 matplotlib/2.2.4 pmclib/1.1
dcmtk/3.6.6 multinest/3.10 pstokes/1.0
dotnet/5.0.202 nccl/2.4.7 sprng/5.0
easydict/1.7 nccl/2.8.4 statsmodels/0.9.0
fastq_screen/0.13.0 openslide/3.4.1
gsutil/350 p7zip/16.02
~~~~~~~~~~~~~~~~~~~~~~~~~~ category: machine learning ~~~~~~~~~~~~~~~~~~~~~~~~~~
1/1.01 py-faster-rcnn/July2018
1/2.03 rapidjson/1.1.0
attend2u/20180216 scikit-learn/0.19.1
cudnn/5.1 scikit-learn/0.21.2
cudnn/6.0 sciml_class/pytorch-21.06
cudnn/7.0 tensorflow/1.1.0_cpu
cudnn/7.4 tensorflow/1.1.0_gpu
cudnn/7.6 tensorflow/1.13.1_cpu_py3
cudnn/7.6.5 tensorflow/1.13.1_gpu
cudnn/8.1.0 tensorflow/1.13.1_gpu_keras
cudnn/8.2.0 tensorflow/1.13.1_gpu_py3
deeparg/Jan2019 tensorflow/1.14.0_gpu_py36
deeparg/Oct2018 tensorflow/1.4.1_cpu
deeplabcut/1.01 tensorflow/1.4.1_cpu_py3
deeplabcut/2.03 tensorflow/1.4.1_gpu
deeplabcut/2.1.4 tensorflow/1.4.1_gpu_py3
deeplabcut/2.1.9 tensorflow/1.4.1_gpu_py3_cuda9.1
deeplabcut/2.2 tensorflow/1.5.0_cpu_py3
dlib/19.17 tensorflow/1.5.0_gpu
flann/1.8.4 tensorflow/1.5.0_gpu_py3
hnn/1.0 tensorflow/2.0.0_cpu_py37
horovod/0.16 tensorflow/2.0.0_gpu_py37
horovod/0.19.5 tf-horovod/1.0
pcl/1.9.1 xgboost/1.3.3
pcl/1.9.1_nurbs
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: math ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
atlas/3.10.3 lapack/3.7.0 ripser/0.5.3
blas/3.7.0 macaulay2/1.12-1 rss/1.0
cgal/3.14.1 magma/V2.23-10 sage/8.7
fenics/2017.1 magma/V2.25-5 sage/9.0
fenics/2018.1.0 magma/V2.25-5-gpu scalapack/2.0.2
gap/4.9.1 magma-gpu/2.4.0 sympy/1.4
gmsh/3.0.1 magma-gpu/2.5.4_volta trlan/2010.09
lapack/3.4.2 nlopt/2.5.0
lapack/3.6.0 numpy/intel_1.15.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: misc ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mark/Dec18 mysql/8.0.13
mysql/5.7.28 netcdf4-python/4.1.4.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: ml ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bonito/0.3.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: model ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gotm/5.0_qingli gotm/5.3
~~~~~~~~~~~~~~~~~~~~~~~~~ category: molecular dynamics ~~~~~~~~~~~~~~~~~~~~~~~~~
mdanalysis/0.19.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: mpi ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpi/cave_mvapich2_2.3b_gcc
mpi/cave_mvapich2_2.3b_intel
mpi/cave_mvapich2_2.3rc2_gcc
mpi/hpcx_2.7.0_gcc_10.2_slurm20
mpi/hpcx_2.7.0_intel_2020.2_slurm20
mpi/mpich3.3a3_intel_2020.2
mpi/mvapich2-2.3.5_gcc_10.2_slurm20
mpi/mvapich2-2.3.5_intel_2017.0_slurm20
mpi/mvapich2-2.3.5_intel_2020.2_slurm20
mpi/openmpi_2.0.3_intel_2020.2_slurm20
mpi/openmpi_3.1.6_gcc
mpi/openmpi_3.1.6_gcc_10.2_slurm20
mpi/openmpi_4.0.0_gcc
mpi/openmpi_4.0.1_gcc
mpi/openmpi_4.0.4_gcc
mpi/openmpi_4.0.4_gcc_8.3_slurm20
mpi/openmpi_4.0.5_gcc_10.2_slurm20
mpi/openmpi_4.0.5_intel_2020.2_cuda_9.1.85_slurm20
mpi/openmpi_4.0.5_intel_2020.2_slurm20
mpi/openmpi_4.1.1_gcc_10.2_slurm20
osu-mpi/5.3.2
osu-mpi/5.6.2_mvapich2-2.3a_gcc
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: mri ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
afni/17.1.00 freesurfer/6.0.0
afni/18.2.06 freesurfer/6.0.0_rh7
afni/19.0.17 freesurfer/6.0.0_rh7-30-Nov-2018
afni/19.3.08 freesurfer/7.1.1
afni/19.3.10 fsl/5.0.10
afni/20.0.03 fsl/6.0.0
afni/20.1.06 fsl/6.0.3
afni/21.2.04 mmvt/2020-06
ants/2.1.0 mricron/05-2016
ants/2.3.1 mricron/12-2012
ants/2.3.4 mricron/2019-09
dsi/april2019 tortoise/3.1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: neuro ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
dtitk/2.3.1 qit/1.0 qit/2.0 qit/Jun21
~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: neuroscience ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sct/4.2.2
~~~~~~~~~~~~~~~~~~~~~~~ category: numerical optimization ~~~~~~~~~~~~~~~~~~~~~~~
bayop/1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: other ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sbt/1.2.3
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: package ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ffte/6.0 ffte/6.0/mpi
~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: performance ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ior/2.10.3 ipm/2.0.6_r
ior/3.0.1 osu-mpi/5.3.2
ior/3.2.1 osu-mpi/5.6.2_mvapich2-2.3a_gcc
ipm/2.0.6 papi/5.4.3
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: physics ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
casa/5.1.2
geant/4.10.04.p01
geant/4.10.3
geant/4.10.5
geant/4.9.4.p04
gpaw/0.10.0
gpaw/1.2.0
gpaw/1.2.0_hpcx_2.7.0_gcc
gpaw/1.2.0_mvapich2-2.3a_gcc
gpaw/20.10.0_hpcx_2.7.0_intel_2020.2_slurm20
gpaw/20.10_hpcx_2.7.0_intel_2020.2_slurm20
gpaw/21.1.0_hpcx_2.7.0_gcc_10.2_slurm20
gpaw/21.1.0_openmpi_4.0.5_gcc_10.2_slurm20
gpaw/21.1.0a_openmpi_4.0.5_gcc_10.2_slurm20
hoomd/2.9.0
jdftx/1.4.2
lumericalfdtd/8.16.982
mcx/20180525
mcxlab/2017.7
mujoco-py/1.50.1.23
pymultinest/2.9
root/6.10
~~~~~~~~~~~~~~~~~~~~~~ category: profiling and debugging ~~~~~~~~~~~~~~~~~~~~~~~
cube/4.3.4 ncdu/1.14
ddd/3.3.12 scalasca/2.3.1_intel
gdb/7.12.1 scorep/3.0_intel_mvapich2
gperftools/2.5 valgrind/3.12.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: python ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
numpydoc/0.9.1 pytables/3.5.2 six/1.12.0
plotly/3.9.0 python_igraph/0.7.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: python library ~~~~~~~~~~~~~~~~~~~~~~~~~~~
wx/1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: software ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
annovar/2018Apr16 orthofinder/2.2.7 orthofinder/2.3.3
~~~~~~~~~~~~~~~~~~~~~~~~ category: software management ~~~~~~~~~~~~~~~~~~~~~~~~~
maven/3.2.2 maven/3.8.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: solvers ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
eigen/3.2.2
eigen/3.3.2
eigen/3.4.0
mcl/12.135
mineos/1.0
mumps/5.0.2
mumps/5.0.2-seq
openfoam/4.1
openfoam/4.1a
openfoam/7.0_hpcx_2.7.0_gcc_10.2_slurm20
pari/2.11.2
pastix/5.2.3
petsc/3.14.2_hpcx_2.7.0_gcc_10.2_slurm20
petsc/3.14.2_hpcx_2.7.0_intel_2020.2_slurm20
petsc/3.14.2_mpich3.3a3_intel_2020.2
petsc/3.7.5
petsc/3.7.7
petsc/3.8.3
polyrate/17C
scotch/6.0.4
suiteparse/4.5.4
trilinos/12.12.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: stat ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
seaborn/0.10.0
~~~~~~~~~~~~~~~~~~~~ category: statistical analysis package ~~~~~~~~~~~~~~~~~~~~
glmnet/1.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: statistics ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
JAGS/4.2.0 R/3.6.3 caffe/1.0_with_cudnn
JAGS/4.3.0 R/4.0.0 mallet/2.0.8rc3
R/3.3.2 R/4.0.3 rstudio/1.0.44
R/3.4.0 R/4.0.5 rstudio/1.1.463
R/3.4.3 R/4.1.0 rstudio/1.4.1103
R/3.4.3_mkl SAS/9.4M6 stata/14
R/3.4.4 SAS/9.4b stata/15
R/3.5.2 caffe/1.0 wfu_pickatlas/3.0.5b
R/3.6.0 caffe/1.0_CPU_ONLY
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: sys ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
dos2unix/7.4.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: system ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
wayland/1.18.0 xfce/4.10 xfce/4.16
wayland-protocols/1.20 xfce/4.12
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: tex ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pandoc/2.9.2.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: text editing ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
texstudio/2.12.16
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: tool ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
dcm2niix/25.0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: tool kit ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
subread/1.6.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: tools ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
idr/2.0.2 omero/5.6.2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: utilities ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
atom/1.19.3 git/2.10.2
bamaddrg/20180928 git/2.20.2
binutils/2.29.1 git/2.29.2
binutils/2.31 h4cf/1.2
chrome/55.0 h5py/2.9.0
chrome/73.0 intltool/0.51.0
cmake/3.10.1 itstool/2.0.4
cmake/3.15.4 json_cpp/1.9.4
cmake/3.20.0 json_fortran/8.1.0
cmake/3.6.3 kallisto/0.46.1
cmake/3.8.0 libevent/2.1.8
colordiff/1.0.18 libwnck/3.24.1
comsol/5.2 mercurial/5.1
comsol/5.6 ncurses/6.2
cppunit/1.14.0 pdftk/2.02
curl/7.61.1 perf-tools/2.7
cvs/1.11.23 rclone/1.51.0
depot_tools/Jan2019 rsync/3.1.3
engineering/19.10.237 spfft/0.9.12
engineering/calibre2020.1_36 sublime/2.0.2
express/1.5.1 svn/1.8.17
fileZilla/3.10.0 svn/1.9.5
firefox/56.0.2 texinfo/4.13a
firefox/59.0.2 texlive/2018
firefox/66.0.3 vim/8.1
firefox/68.0 vim/8.1_py3
firefox/87.0 vnc-apps/7.2
ghostscript/9.21 xxdiff/4.0.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: utility ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
redis/6.2.4
~~~~~~~~~~~~~~~~~~~ category: version record for large files ~~~~~~~~~~~~~~~~~~~
gitlfs/2.7.1
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: vision ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
opencv/3.2.0 scikit-image/0.13.1 tesseract/3.05.00
opencv/3.4.1 scikit-image/0.15.0 tesseract/4.00.00
~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: visualization ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
atomeye/3.0
basemap/1.2.0
blender/2.78
blender/2.79
blender/2.90.1
cartopy/0.16.0
cartopy/0.17.0
cave-demo/yurt
cave-utils/yurt
caviar/1.0
ferret/7.1
gdal/2.1.3
gdal/2.4.0
gdal/3.0.4
gephi/0.9.2
gimp/2.8.22
gimp/2.9.6
glm/0.9.9
glm/0.9.9.5
grace/5.1.25
graphviz/2.40.1
minvr/0.3master
minvr/0.4
minvr/beta
minvr/beta-bleeding
minvr/dev_ben
ncview/2.1.7
openscad/2015.03-3
openscenegraph/3.4.0
osgearth/2.7
ovito/2.8.2
ovito/2.9.0
paraview/5.1.0
paraview/5.1.0_yurt
paraview/5.4.1
paraview/5.6.0_no_scalable
paraview/5.6.0_yurt
paraview/5.8.0
paraview/5.8.0_mesa
paraview/5.8.0_release
paraview/5.8.1_openmpi_4.0.5_intel_2020.2_slurm20
paraview/5.9.0
photoscan/1.3.0
pyshp/2.0.1
shapely/1.6.4
tecplot/2017
tecplot/2017R3
tecplot/2018R2
tecplot/2019R1
unity/Unity-2017.3.0b1
unity/unity-editor-2017.2.0f3
visit/2.13.2
visit/2.7.2
vmd/1.9.3
vrg3d/265
vrg3d/265_compat
vrg3d/265_demos
vtk/5.6.1
vtk/7.1.1
vtk/7.1.1a
vtk/8.1.0
xcrysden/1.5.60
~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: vizualization ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
metashape/1.5.4
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: weather ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
wrf/3.6.1
wrf/4.2.1_hpcx_2.7.0_intel_2020.2_slurm20
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ category: workshop ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
workshop/1.0 workshop/3.0