# Currently Available Modules

If you require a software package that is not currently available on the Oscar cluster, please [contact ICERM's IT staff](mailto:support@icerm.brown.edu?subject=Oscar+Software+Request) and we will work with CCV to get the software installed.

*This list is current as of May 6, 2025. Please scroll across the code snippet to see the full list. For the most up-to-date list of software modules, log into your Oscar account and run the command `module avail`.*

Note: D is the default module.

```bash
abaqus-container/2021-akaeexs                    filezilla/3.49.1-epfjuus                       mafft/7.505-iuicuiv                         qit/2023-04-04-grwuvgg
   abaqus/2017-q4ghhm5                              flashpca/2.0-zr2wflq                           magma-usyd/V2.28-8-p3zylpg                  qmcpack-mpi/3.16.0s-qp2hymx
   abaqus/2021.1-i675dvw                            freebayes/1.3.6-v7rppcd                        magma/2.7.1-cpueyjy                         qscintilla/2.11.6-dq7zlcq
   abaqus/2024-h5273a3                       (D)    freeglut/3.2.2-76qqoqn                         maple/22-cp2uld4                            qt/5.15.9-fb7mjex
   abaqus/2024-ir-a4m5ld5                           freesurfer/7.3.2-zop5n6m                       mark/2018.07.08-43snzfu                     qualimap/2.2.1-mybpdoi
   abaqus/2024-mbessa-ceayfuo                       freesurfer/8.0.0-jotmypd                (D)    materialstudio/2024s-gbc3dg6                quantum-espresso-mpi/7.1-gits-v4bxgtv
   abaqus/2024.1-7pcdqhp                            fsl/6.0.7.7s-bul4mby                           mathematica/13.2.0-n4i6yua                  quantum-espresso-mpi/7.1s-ia43pjk
   admixture/1.3.0-onwaqrp                          fv/5.5.2-g2ibb5x                               matlab/R2019a-rjyk3ws                       quantum-espresso-mpi/7.3s-kydgjwo     (D)
   afni/23.3.07s-zm43m3u                            fzf/0.45.0-pdwl7a4                             matlab/R2023a-xd6f7ph                (D)    r/4.0.0-p7gxu4e
   afni/24.2.01s-kstpoqt                     (D)    gatk/4.3.0.0-234wqft                           matlab/R2024b-ipaztju                       r/4.0.3-pvf2znb
   anaconda/2023.09-0-7nso27y                       gaussian/09_v1-u6klkps                         maven/3.8.4-w3zgh4v                         r/4.1.0-bfjsvw5
   angsd/0.935-cbhuwc7                              gaussian/09-D01_v2-tw73726                     mercurial/5.8-vly6btb                       r/4.2.2-z6qdiis
   ant/1.10.13-alpqj4j                              gaussian/09-D01-TEST_v3-vv6ar67                mesa/22.1.6-yi2tztm                         r/4.3.1-lmofgb4
   ants/2.4.3-75npyop                               gaussian/16-C01-bb2r2gh                 (D)    meson/1.6.0-eipcwzq                         r/4.4.0-yycctsj
   aria2/1.36.0-lsb7zcs                             gaussview/v05-mkdyw6j                          metis/5.1.0-7qoahod                         r/4.4.2-re5rjx3                       (D)
   arm-forge/22.1.3-zq7lvdq                         gcc/6.5.0-lwshmxc                              miniconda3/23.11.0s-odstpk5                 raisd/2.9-svyic22
   armadillo/12.2.0-4clpczv                         gcc/10.1.0-mojgbnp                             miniforge/23.11.0-0s-hwmjdtj                rclone/1.62.2-o4lkrv6
   atom/1.19.3-ty5sdsn                              gcc/13.1.0-nvrtbp3                      (D)    minimap2/2.14-33hmvx2                       readline/6.3-rnqups2
   autoconf/2.69-p4rpdx2                            gcm/2.4.1-lfqoarh                              molden/6.7-isryqwj                          readline/8.2-5xbuyjt                  (D)
   autoconf/2.71-opdgqnq                     (D)    gdal/3.7.0-4p4onmf                             molden/7.3-kytvh3m                   (D)    root/6.28.04-u7t5ax7
   avogadro2/1.99.0-5zl5qaw                         gdal/3.10.3-4vc4f76                     (D)    molpro-mpi/2023.2.0s-vyfv74n                rsem/1.3.3-5obucw6
   awscli/1.27.84-v22kngs                           geeqie/2.4-6vdnc4v                             molpro-mpi/2024.3.1-mpipr-hwakoux    (D)    rstudio/2023.09.1-lsqy746
   bamtools/2.5.2-ki3mdef                           geos/3.11.2-a6hfu6a                            mpc/1.3.1-zbino7j                           ruby/3.1.0-gnoxsfm
   basilisk/2023.11.11s-x4isdvp                     ghostscript/10.0.0-3atesdh                     mpfr/4.2.0-n2tkxso                          rust/1.73.0-647r2tw
   bazel/6.1.1-vvtxktr                              gimp/2.10.32-tlknk2n                           mriconvert/2.1.0-oaq24fz                    rust/1.81.0-3qqoayc                   (D)
   bbmap/39.01-jnnkpwk                              git-lfs/3.3.0-laphnvj                          mricrogl/2022.07.20-n3b7whc                 sage-container/10.3-avpqipf
   bcftools/1.13-76jesdj                            git/2.44.0-6f7n7ni                             mricron/201909-3s2phrj                      sage/9.5-drpqjkh
   bcftools/1.16-ewu6fpe                     (D)    glew/2.2.0-plawm2j                             msmc2/2.1.4-cuac55f                         sage/10.3-nntihfr                     (D)
   bcl2fastq2/2.20.0.422-z3wh636                    glm/0.9.9.8-m3s6sze                            multiwfn/3.8_1208-qn65pif                   salmon/1.9.0-itdua6n
   beagle/5.4-e43mqsa                               glpk/5.0-zifs7bb                               mummer4/4.0.0rc1-4llgadq                    salmon/1.10.1-43ljn7g                 (D)
   bedops/2.4.40-bjb2v2n                            gmap-gsnap/2024-08-20-dur7jyc                  muscle/3.8.1551-pys2b76                     samtools/1.12-4v4uiz6
   bedtools2/2.31.0-lsohc7s                         gmp/6.2.1-qlaig4m                              mysql/8.0.29-w7xdbde                        samtools/1.16.1-txuglks               (D)
   bismark/0.23.0-eoksupu                           gnuplot/5.4.3-pdiiquy                          nanoflann/1.4.3-u2l24dv                     sas/9.4m8-f2f3xdp
   blast-legacy/2.2.26-tcdku3a                      go/1.17.1-f4mqosa                              nbo/7.0-phausw3                             schmutzi-container/1.5.7-vsorpcq
   blast-plus/2.2.30-cyxldrt                        go/1.20.3-xknmcqd                              nccl/2.16.2-1-gjmprw5                       schmutzi-container/1.5.7-3imwf7h      (D)
   blat/37-ebfj5e6                                  go/1.23.3-d3wvs6z                       (D)    ncdu/1.18.1-uofylp6                         schrodinger/2023-4-h3kvbn3
   blender/4.4.0-446jdgt                            google-cloud-cli/456.0.0-3mtj4z6               nco/5.1.5-36hru5t                           schrodinger/2024-1-yqi27-m4qqm46      (D)
   boost/1.80.0-harukoy                             gperf/3.1-56q4xf5                              ncview/2.1.8-nxepxtw                        scons/4.5.2-housgyw
   bowtie/1.3.1-2kd7din                             grace/5.1.25-duvo7rn                           neovim/0.9.4-67stov2                        seqkit/0.10.1-qtiftw4
   bowtie2/2.4.2-xdquyzq                            graphviz/8.0.1-75znavc                         neovim/0.10.4-7b4mer5                (D)    seqtk/1.3-kbdjwob
   bowtie2/2.5.3-qgscc2u                     (D)    gsl/2.7.1-khmyfcy                              netcdf-c/4.9.2-cfggqwi                      shapeit4/4.2.2-3us45un
   brotli/1.0.9-h22dril                             guppy/6.0.1-wpaqayj                            netcdf-c/4.9.2-4ozokng               (D)    singular/4.4.0-aeloppr
   bwa/0.7.17-lu4b4dj                               guppy/6.1.2-wwvvdfu                     (D)    netcdf-cxx4/4.3.1-6gcdg5s                   skewer/0.2.2-nwhklgr
   bxh-xcede-tools-container/1.11.14-4sphv7n        gurobi/10.0.1-q7rc5dw                          netcdf-fortran/4.6.0-kl27oji                slicer/5.4.0-rb2kk4l
   cadence/IC06.18-calibre2022.2-ascb7dw            hdf5/1.12.2-s6aacp3                            netcdf/4.9.2-ar77jpt                        slim/4.0.1-kymgtmu
   cadence/IC06.18.090-6famfci                      hdf5/1.14.1-2-rdd6y6v                   (D)    netlib-lapack/3.11.0-jdzmstx                slim/4.3-u22vcwu                      (D)
   cadence/IC23.10.000-ppqll2n               (D)    hisat2/2.2.1-gn4pb3l                           netlogo/6.4.0-psm765m                       spdlog/1.11.0-qbi24my
   casa/6.6.0-20-py3.8.el7-dqvn5lw                  homer/4.11.1-fpjs4l4                           netpbm/10.73.43-m2jdopk                     splash/2.1.4-unrsfpj
   cdhit/4.8.1-bqmf4jf                              hpcx-mpi/4.1.5rc2-mts-ukpby4i                  ngc-jax/23.10-paxml-py3-ziphcif             spm/8-77b5myx
   cellranger/arc-2.0.1-uamrhhu                     hpcx-mpi/4.1.5rc2s-yflad4v              (D)    ngc-pytorch/24.03-py3-a6ptiby               spm/12_r7606-prcq7fg                  (D)
   cellranger/atac-2.0.0-m2tfcpk                    htop/3.2.2-kqsjlaj                             ngc-tensorflow/24.03-tf2-py3-lmnuwwg        sratoolkit/3.0.0-u4jvgps
   cellranger/6.0.0-dbztt7r                  (D)    htslib/1.12-ecidzx4                            ninja/1.11.1-k2aq3rl                        stacks/2.65-geg4r7a
   cfitsio/4.2.0-5grfqtu                            htslib/1.17-zxcat2k                     (D)    nlopt/2.7.1-fwj27pk                         star/2.7.10b-fj6kao2
   cgal/5.4.1-64mikhl                               idba/1.1.3-nrxiqtw                             nnn/4.9-r7kawsv                             stata/mp17-v7a7uoo
   chrome/119.0.6045.159s-avadhvk                   idemp/201706-a45gc3d                           node-js/18.12.1-qkps4za                     stata/mp18-3wq5b4o                    (D)
   cli11/2.3.2-pcucv7l                              idl/8.9s-jocgnbh                               nvhpc/23.3-xa4nyqi                          stow/2.4.0-y2q7tsn
   clustal-omega/1.2.4-mbj3dq5                      igraph/0.7.1-wbiepb3                           nvhpc/23.7-alnzdzw                          stringtie/2.2.1-7uti3ny
   cmake/3.6.1-il7bkvj                              imagej/154-linux64-java8-jd6sflr               nvhpc/25.1-scvc2ac                   (D)    sublime-text/4.4143-im3loi3
   cmake/3.26.3-xi6h36u                      (D)    imagemagick/7.1.1-3-ex4k4u2                    nvtop/3.0.1-7r22pjl                         subread/2.0.2-5agghnd
   cnvnator/0.4.1-w3bkqjf                           inkscape/1.3s-gshcpwc                          octopus-lunter/0.7.4-kkqrfv3                swig/4.1.1-bq46cxl
   code-server/4.20.0-tcrmrcm                       intel-oneapi-compilers/2023.1.0-a7fw7qt        ollama/0.3.14s-a3gonhs                      synopsys/2023.12-df4a3ab
   code-server/4.97.2-33bvsj5                (D)    intel-oneapi-mkl/2023.1.0-xbcd2g3              ollama/0.5.12s-mjarasi               (D)    synopsys/2024.09-q3jwzot              (D)
   colordiff/1.0.21-ifskyqr                         intltool/0.51.0-vanhjsr                        openbabel/3.1.1-nay2mkb                     tabix/2013-12-16-d6qvxp7
   comsol/5.2-ufifhtv                               iq-tree/2.1.3-gu64b4j                          openblas/0.3.23-u6k5fey                     tcl/8.6.12-dziqp2l
   comsol/5.6_yqi27-jnspqto                         iq-tree/2.3.6-fn5vscb                   (D)    opencv/4.6.0s-5z4piup                       tcsh/6.24.10-dtqo5ky
   comsol/6.3_yqi27-7yf67lt                  (D)    iraf/2.17.1s-2r7ypc5                           openexr/3.1.5-6fapou6                       tecplot/2022r1-q5cg2zq
   conn/22a-nztrdv3                                 itk-snap-container/4.0.2-bychj73               openjdk/11.0.17_8-nw5ylvi                   tesseract/4.1.1-l2ejycz
   connectome-workbench/1.5.0-t66riqu               jags/4.3.1-4mvaxc3                             openjdk/17.0.5_8-pq2e7ao             (D)    tesseract/5.3.3-vq3altt               (D)
   cppunit/1.14.0-h3hsjgu                           jellyfish/2.2.7-dywzm7z                        openjpeg/2.5.0-iyu5vwb                      texlive/20220321-pocclov
   crossrate-container/2016-27ofi4r                 jo/1.9-ki7xc2u                                 openmpi/4.1.2-s5wtoqb                       texstudio/3.0.1-64vxo64
   cuda/10.1.243-bxisbai                            json-fortran/8.3.0-ehkzpjv                     openmpi/4.1.4s-smqniuf                      tk/8.6.11-uqpqlly
   cuda/10.2.89-xnfjmrt                             jsoncpp/1.9.5-vhsa2iy                          openmpi/4.1.5-kzuexje                       tmux/3.3a-zyhjvvh
   cuda/11.8.0-lpttyok                              julia/1.9.3s-i3zndt3                           openmpi/5.0.1s-6ti4ij7                      tmux/3.5a-kcjtgnd                     (D)
   cuda/12.1.1-ebglvvq                              julia/1.11.1s-kueea5s                   (D)    openmpi/5.0.2s-mfj2kfp               (D)    tn93/1.0.12-tcvbyl4
   cuda/12.2.0-4lgnkrh                              kraken/1.1.1-e6r2aej                           openslide/3.4.1-pzjb2kl                     tree/2.1.0-7tlhzo7
   cuda/12.3.0-r72aozf                              lemon/1.3.1-jh3h4xt                            openssl/1.1.1t-u2rkdft                      trimal/1.4.1-ace7du2
   cuda/12.4.0-piq32fy                       (D)    leptonica/1.81.0-pebiyok                       or-tools/9.10-k4nov4d                       trimgalore/0.6.6-iwfrq4c
   cudnn/7.5.1.10-10.1-hv4e2lt                      leveldb/1.23-f76iwfr                           ovito/3.6.0-rile7ax                         trimgalore/0.6.9-hisz5xp              (D)
   cudnn/8.7.0.84-11.8-lg2dpd5                      lftp/4.9.2-vimt4vf                             p7zip/17.05-3xtimiz                         trimmomatic/0.39-w5jnhai
   cudnn/8.9.6.50-12-56zgdoa                        libarchive/3.6.2-mnc5shn                       pandoc/2.19.2-wawlx5m                       udunits/2.2.28-rycabdx
   cudnn/9.8.0.87-12-j5i4iki                 (D)    libbeef/Nov2020-xhrdwg5                        pangolin/0.6-vwij3iv                        usearch/11.0.667-wx6utmj
   cufflinks/2.2.1-ogzw3z5                          libdeflate/1.10-5yi7m3g                        parallel/20220522-5ah2i5h                   v8/3.14.5-aompxje
   cutensor/1.5.0.3-gqkzath                         libgd/2.2.4-2iyhgxa                            paraview/5.9.0s-dgv24kr                     vasp-mpi/5.4.4-mdh3hpy
   datamash/1.8-ib4aakp                             libgd/2.3.3-ubu4k2f                     (D)    patchelf/0.17.2-aqmx4qb                     vasp-mpi/5.4.4-wannier-cqhzfma
   dcm2niix/1.0.20220720-nwsidfo                    libgeotiff/1.6.0-voueb6b                       paup/4.0a168-cwt24ux                        vasp-mpi/6.3.2_avandewa-chn3w3j
   diamond/2.0.15-h7xx24l                           libgit2/1.6.4-a432pgi                          pcre2/10.42-xks64jg                         vasp-mpi/6.4.2_cfgoldsm_vtst-cff5qmk
   dicombrowser/20181217s-ikvqhyr                   libiconv/1.17-jwjcds2                          pdftk/2.02-gu7lpeg                          vasp-mpi/6.4.2_cfgoldsm-7krhcss
   dlib/19.22-lxah7rq                               libjpeg-turbo/2.1.5-sewtk5u                    pdsh-chaos/23.12-t6ywlrp                    vasp-mpi/6.4.3_cfgoldsm-5dioee2
   dmtcp/3.0.0-xvfukfp                              libjpeg/9e-6djp5nd                             perl-dbi/1.643-t74vmeb                      vasp-mpi/6.4.3_yqi27-wannier-livyes6
   dorado/0.8.2-s42dhri                             libnsl/1.3.0-calriiy                           perl/5.26.2-o4iq4b4                         vasp-mpi/6.4.3_yqi27-6uzdgwn          (D)
   dos2unix/7.4.2-5a6dlgt                           libnsl/2.0.1-ed2i5hn                    (D)    perl/5.36.0-bt34quz                  (D)    vcftools/0.1.14-syssqsi
   dotnet/8.0.100-5lr7bga                           libpng/1.2.57s-lve65hz                         perl/5.37.9-og4osvm                         vim/9.1.0867-wl3haj7
   dropest/0.8.6-ewwx5ik                            libpng/1.5.30-ru3zswz                          perl/5.40.0-o7hxci2                         virtualgl/3.1-yphbrfj
   ds/9.8.5s-zpqg2jy                                libpng/1.6.39-ryxiwrd                   (D)    picard/2.26.2-qabtyqy                       visit-container/3.3.3-qz3dni6
   dsi-studio/chen-2023-sif-lytwlk2                 libreoffice/7.2.2.sif-drpjygp                  pigz/2.7-zgdlry3                            visit-mpi/3.3.3s-lz2dp7m
   dtitk/2.3.1s-bp7yqjh                             libsdl/2.30.7-4rxs72s                          plink/1.9-beta6.27-nvy4vrx                  vmd/1.9.3-oin2dnj
   eigen/3.4.0-uycckhi                              libsodium/1.0.20-4o75gk3                       plink/2.00-b6x44xw                   (D)    vscode/1.84.2-4tfimgp
   eigensoft/7.2.1-6ctbhoz                          libtiff/4.5.0-g6fga7e                          popoolation2/1.205s-luyjn2b                 vscode/1.97.2-txhgk3l                 (D)
   emacs/28.2-rwds2pd                               libtree/3.1.1-yxst452                          postgresql/16.4-vzmexkn                     wcstools/3.9.7-lo4forb
   expat/2.5.0-zujcztp                              libvips/8.13.3-ex4pfpg                         prodigal/2.6.3-vbq7usx                      wxwidgets/3.2.2.1-mk5eiyq
   fastme/2.1.5.1-kmg5til                           libwnck/3.24.1-4gvyjhg                         proj/9.2.0-ni5rcfb                          xcrysden/1.5.60-nuxe46i
   fastp/0.23.4-xmfbk37                             libx11/1.8.4-qdzkebe                           protobuf/3.22.2-6hlkkut                     xerces-c/3.3.0-djupwmt
   fastq-screen/0.15.3-7ymgrux                      libxc/4.3.4-uy5ogwb                            py-ase/3.21.0-pyuljod                       xeyes/1.2.0-nge56yb
   fastqc/0.11.9-mvd2uhw                            libxc/5.2.3-ncc5ir4                     (D)    py-matplotlib/3.7.1-4afsjsz                 xgboost/1.6.2-fp3ii65
   fastqc/0.12.1-sk2rb3a                     (D)    libyaml/0.2.5-wdpye7g                          py-statsmodels/0.13.2-sbdhj4k               yaml-cpp/0.7.0-6nno2ru
   fasttree/2.1.11-o5kvig7                          libzip/1.3.2-qwqikw6                           py-sympy/1.11.1-gqgr7wu                     zlib/1.2.13-jv5y5e7
   fastx-toolkit/0.0.14-zhaxiyn                     liggghts/3.8.0s-rqph5mk                        pycharm-community/2021.3.3-weqrcly          zoxide/0.9.2-ydhigq6
   ferret/7.6.0-i6u5m7q                             linaro-forge/23.1.2-pk2lobu                    pypy/7.3.13-6a5ma5j                         zstd/1.5.5-zokfqsc
   ffmpeg/6.0-fy677gn                               llvm/16.0.2-mq6g5lb                            python/3.9.16s-x3wdtvt
   ffmpeg/7.0-xny2fb2                        (D)    lmod/8.7.24-w2akdkb                            python/3.11.0s-ixrhc3q               (D)
   fiji/20231107-1617-espdc7g                       macaulay2-container/1.2-vupc5gy                qgis/3.28.3-5axmqsj
```